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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909565.1_cds_XP_016459756.1_53250
CDS Infomation

[gene=LOC107783297] [db_xref=GeneID:107783297] [protein=cathepsin B-like] [protein_id=XP_016459756.1] [location=join(32934..33002,33728..33781,33873..33953,34068..34224,34335..34414,34634..34759,34871..35089,35538..35651,35744..35779,36297..36434)] [gbkey=CDS]
Sequence

ATGGCCTTGACTCTGAAGTCTTTAGCAACTCCTTTGCTTTTGGGTGCTTTCTTTATCCTT
GTATTGCAGGTTGTTGCAGAGAAGCCAATATCTGAAGCTAAAGTTGAGTCTGCAATCCTT
AAGGAATCTATCATCAAAGAGGTTAATGAAAATGCCAAAGCTGGATGGAAAGCTGCATTC
AACCCTCAATTCTCGAATTTCACGGTTTCACAATTTAAGCGCCTTCTTGGAGTTAAGCCC
GCACGAGAAGGTGATTTGGAGGGAATTCCACTTCTAACTCATCCTAAACTTTCGGAGCTA
CCAAAAGAGTTTGATGCACGAAAAGCTTGGCCTCAATGTAGCACTATCGGAAGAATTCTG
GATCAGGGACATTGCGGTTCTTGTTGGGCTTTTGGTGCTGTTGAATCGTTGTCTGATCGT
TTCTGTATCCATCACAACTTGAATATCTCTCTGTCTGTAAATGATCTGCTAGCATGCTGT
GGCTTTTTATGTGGATCCGGTTGTGATGGTGGATATCCTATATCAGCATGGCGATACTTT
ATCCGTAGGGGTGTGGTCACAGAAGAGTGTGACCCTTACTTTGATAATGAGGGATGTTCG
CACCCGGGTTGTGAACCAGGATATCCCACCCCAAAGTGCCAGAGGAAGTGTGTGAAGGAG
AACCTACTATGGGGGAAATCAAAGCATTATGGTGTCAATGCATACAGAATCCACCGTGAT
CCCTACAGTATCATGACAGAAATTTACAAAAATGGACCAGTTGAGGTCTCGTTTACAGTG
TACGAGGATTTTGCTCACTACAAGTCAGGAGTTTACAAGCACGTAACAGGTCAAAGTATG
GGAGGCCATGCTGTTAAGCTTATCGGATGGGGAACTAGTGAACAGGGAGAGGACTATTGG
CTTATCGCAAATTCTTGGAACAGAGGCTGGGGTGATGATGGTTACTTCAAGATCAGAAGA
GGAACAAATGAGTGTGGCATTGAACATAATGTGGTGGCTGGATTGCCTTCTGCAAAAAAT
CTGAATGTGGAACTTGATGATGTATCTGATGCTTTCCTTGATGCCTCAATGTAA

Peptide Sequence

PEP ID

XP_016459756.1
PEP Infomation

PREDICTED: cathepsin B-like [Nicotiana tabacum]
Sequence

MALTLKSLATPLLLGAFFILVLQVVAEKPISEAKVESAILKESIIKEVNENAKAGWKAAF
NPQFSNFTVSQFKRLLGVKPAREGDLEGIPLLTHPKLSELPKEFDARKAWPQCSTIGRIL
DQGHCGSCWAFGAVESLSDRFCIHHNLNISLSVNDLLACCGFLCGSGCDGGYPISAWRYF
IRRGVVTEECDPYFDNEGCSHPGCEPGYPTPKCQRKCVKENLLWGKSKHYGVNAYRIHRD
PYSIMTEIYKNGPVEVSFTVYEDFAHYKSGVYKHVTGQSMGGHAVKLIGWGTSEQGEDYW
LIANSWNRGWGDDGYFKIRRGTNECGIEHNVVAGLPSAKNLNVELDDVSDAFLDASM

Transcript Sequence

Gene sequence data has not been registered.